Pomorski fakultet je (su)organizirao sljedeće znanstvene skupove:
- Baška GNSS Conference – Annual global navigation satellite systems conference, 2006-
- MIPRO–Annual international ICT conference, Opatija, 2010-
- My First Conference – Annual engineering PhD students’ conference, Rijeka, 2017-
- International Conference on Marine Technology (in memoriam of the academician Zlatko Winkler),-Biennial international conference on marine technology, Rijeka, 2019-
- International Conference of Maritime Science & Technology Naše more, Dubrovnik, 2019
- International Multidisciplinary Conference on Sea, Transport and Logistics, Opatija, 2017
- 16th International Association of Maritime Universities Annual General Assembly & Conference (IAMU AGA), Opatija, 2015
- United Nations/Croatia Workshop on the Applications of Global Navigation Satellite Systems, Baška, 2013
- International Maritime Lecturers Association Conference (IMLA 19), Opatija, 2011
